Thesis Project Form
Title (tentative): Characterization of sleep-wake cycle spectral state maps in healthy and pathological experimental conditionsThesis advisor(s): Chiappalone Michela, Vinicius R. Cota (IIT; Vinicius.RosaCota@iit.i) | E-mail: |
Address: Via Opera Pia 13, 16145 Genova | Phone: |
Description
Motivation and application domain
State spaces generated from features of neural electrophysiological signals have been successfully used for the interpretation of brain phenomena and disorders. A particularly promising application is the construction of bi-dimensional state spaces based on the spectral content of local field potentials (LFP) for the characterization of the sleep-wake cycle (SWC) architecture in both healthy and pathological scenarios. The goal of this project is two-fold: 1) to implement and develop methods of objectively characterizing state spaces for the study of the effects of brain lesions in the SWC of experimental animals; 2) to apply the methodology for the investigation of the effects of brain lesions (acute induction of stroke) in the SWC of experimental animals, and; 3) to assess the putatively beneficial effects of therapeutic neuromodulation.
General objectives and main activities
This thesis falls within the multidisciplinary domains of neurophysiological signal processing, neuromodulation, and neurorehabilitation, under the umbrella of the main field named neuroengineering. The general objectives and specific activities are following:
1. To implement standard metrics of assessing state space, such as position and size of agglomerate of points (clusters), frequency and velocity of transitions.
2. To develop new means of quantifying state space.
3. To integrate state space metrics with other LFP signal processing analysis, such as cross-frequency coupling measures.
4. To develop methods based also on MUA (Multi Unit Activity) analysis
5. To apply all developed methods to datasets collected from animals submitted to experimental stroke and to therapeutic neuromodulation.
1. To implement standard metrics of assessing state space, such as position and size of agglomerate of points (clusters), frequency and velocity of transitions.
2. To develop new means of quantifying state space.
3. To integrate state space metrics with other LFP signal processing analysis, such as cross-frequency coupling measures.
4. To develop methods based also on MUA (Multi Unit Activity) analysis
5. To apply all developed methods to datasets collected from animals submitted to experimental stroke and to therapeutic neuromodulation.
Training Objectives (technical/analytical tools, experimental methodologies)
• Neurophysiological signal processing
• Data analysis and statistical testing
• In vivo set-up use and optimization
• Experiments in vivo (wherever possible)
• Animal models of neurological disorders
• Depending on the development: hardware programming using HDL
• Data analysis and statistical testing
• In vivo set-up use and optimization
• Experiments in vivo (wherever possible)
• Animal models of neurological disorders
• Depending on the development: hardware programming using HDL
Place(s) where the thesis work will be carried out: DIBRIS at UniGe and the Istituto Italiano di Tecnologia, Rehab Technologies Lab and the Neuroscience and Brain Technologies Department
Additional information
Pre-requisite abilities/skills: MATLAB programming skills, signal processing, statistics, attitude to experimental work
Curriculum: Neuroengineering
Maximum number of students: 1
Financial support/scholarship: --